Sequencher brings some of the best peer-reviewed NGS algorithms out of the
command line and into your hands. Beginners can start aligning their NGS data
immediately while advanced users still have access to each command line input
via an easy to understand interface. Perform SNP analyses, align methylated
data, and perform de novo assemblies or reference-guided alignments.
Sequencher's latest NGS functionality includes RNA-Seq data analysis with the addition of the Cufflinks suite. Use your NGS data to explore differential gene expression with multiple graphs to display your results.